IL_8BTK_332
3D structure
- PDB id
- 8BTK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the TRAP complex with the Sec translocon and a translating ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 8BTK|1|A2|U|1586, 8BTK|1|A2|G|1588
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BTK|1|A2|G|1542
8BTK|1|A2|C|1543
8BTK|1|A2|U|1544
8BTK|1|A2|C|1545
8BTK|1|A2|A|1546
8BTK|1|A2|G|1547
8BTK|1|A2|C|1548
8BTK|1|A2|G|1549
8BTK|1|A2|U|1550
8BTK|1|A2|G|1551
*
8BTK|1|A2|C|1583
8BTK|1|A2|C|1584
8BTK|1|A2|G|1585
8BTK|1|A2|U|1586
8BTK|1|A2|U|1587
8BTK|1|A2|G|1588
8BTK|1|A2|A|1589
8BTK|1|A2|A|1590
8BTK|1|A2|C|1591
8BTK|1|A2|C|1592
8BTK|1|A2|C|1593
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AG
- uS14
- Chain Ac
- 40S ribosomal protein S3
- Chain Ae
- Ribosomal protein S5
- Chain Ap
- uS9
- Chain As
- 40S ribosomal protein S19
- Chain At
- 40S ribosomal protein uS10
- Chain Ay
- 40S ribosomal protein S25
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