IL_8BTK_362

3D structure

PDB id

8BTK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the TRAP complex with the Sec translocon and a translating ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGAGAGGUGUAGAAUAA*UACUCUUA

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BTK|1|B5|U|3682
8BTK|1|B5|G|3683
8BTK|1|B5|A|3684
8BTK|1|B5|G|3685
8BTK|1|B5|A|3686
8BTK|1|B5|G|3687
8BTK|1|B5|G|3688
8BTK|1|B5|U|3689
8BTK|1|B5|G|3690
8BTK|1|B5|U|3691
8BTK|1|B5|A|3692
8BTK|1|B5|G|3693
8BTK|1|B5|A|3694
8BTK|1|B5|A|3695
8BTK|1|B5|U|3696
8BTK|1|B5|A|3697
8BTK|1|B5|A|3698
*
8BTK|1|B5|U|3783
8BTK|1|B5|A|3784
8BTK|1|B5|C|3785
8BTK|1|B5|U|3786
8BTK|1|B5|C|3787
8BTK|1|B5|U|3788
8BTK|1|B5|U|3789
8BTK|1|B5|A|3790

Current chains

Chain B5

28S rRNA

Nearby chains

Chain Bi

60S ribosomal protein L36

Chain Bv

Ribosomal protein uL1