IL_8BUU_067

3D structure

PDB id

8BUU (explore in PDB, NAKB, or RNA 3D Hub)

Description

ARE-ABCF VmlR2 bound to a 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UAA*UCA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BUU_067 not in the Motif Atlas

Homologous match to IL_7RQB_065

Geometric discrepancy: 0.0854

The information below is about IL_7RQB_065

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_54997.7

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

8BUU|1|A|U|1708
8BUU|1|A|A|1709
8BUU|1|A|A|1710
*
8BUU|1|A|U|2024
8BUU|1|A|C|2025
8BUU|1|A|A|2026

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain K

50S ribosomal protein L14

Chain P

50S ribosomal protein L19