IL_8BUU_133
3D structure
- PDB id
- 8BUU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ARE-ABCF VmlR2 bound to a 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GA*UGAUC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BUU_133 not in the Motif Atlas
- Homologous match to IL_4LFB_013
- Geometric discrepancy: 0.1482
- The information below is about IL_4LFB_013
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_06671.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
8BUU|1|a|G|300
8BUU|1|a|A|301
*
8BUU|1|a|U|312
8BUU|1|a|G|313
8BUU|1|a|A|314
8BUU|1|a|U|315
8BUU|1|a|C|316
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain p
- 30S ribosomal protein S16
Coloring options: