IL_8BUU_137
3D structure
- PDB id
- 8BUU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ARE-ABCF VmlR2 bound to a 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGAUGAAG*CGUAAAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BUU_137 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.1524
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62329.1
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
8BUU|1|a|U|417
8BUU|1|a|G|418
8BUU|1|a|A|419
8BUU|1|a|U|420
8BUU|1|a|G|421
8BUU|1|a|A|422
8BUU|1|a|A|423
8BUU|1|a|G|424
*
8BUU|1|a|C|435
8BUU|1|a|G|436
8BUU|1|a|U|437
8BUU|1|a|A|438
8BUU|1|a|A|439
8BUU|1|a|A|440
8BUU|1|a|G|441
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
Coloring options: