IL_8BUU_187

3D structure

PDB id

8BUU (explore in PDB, NAKB, or RNA 3D Hub)

Description

ARE-ABCF VmlR2 bound to a 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGG*UUAC

Length

7 nucleotides

Bulged bases

8BUU|1|A|A|943

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BUU_187 not in the Motif Atlas

Geometric match to IL_7ECP_001

Geometric discrepancy: 0.2481

The information below is about IL_7ECP_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

8BUU|1|A|G|927
8BUU|1|A|G|928
8BUU|1|A|G|929
*
8BUU|1|A|U|941
8BUU|1|A|U|942
8BUU|1|A|A|943
8BUU|1|A|C|944

Current chains

Chain A

23S rRNA

Nearby chains