IL_8BYV_040

3D structure

PDB id

8BYV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Staphylococus aureus 30S-RbfA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

CCGCA*UUCCCGG

Length

12 nucleotides

Bulged bases

8BYV|1|a|C|944

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BYV|1|a|C|941
8BYV|1|a|C|942
8BYV|1|a|G|943
8BYV|1|a|C|944
8BYV|1|a|A|945
*
8BYV|1|a|U|1391
8BYV|1|a|U|1392
8BYV|1|a|C|1393
8BYV|1|a|C|1394
8BYV|1|a|C|1395
8BYV|1|a|G|1396
8BYV|1|a|G|1397

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain A

Ribosome-binding factor A

Chain g

30S ribosomal protein S7

Chain i

30S ribosomal protein S9