IL_8C8X_067

3D structure

PDB id

8C8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.93 Å

Loop

Sequence

CCGG*CG

Length

6 nucleotides

Bulged bases

8C8X|1|A|C|1838

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8C8X_067 not in the Motif Atlas

Homologous match to IL_4WF9_070

Geometric discrepancy: 0.2576

The information below is about IL_4WF9_070

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C8X|1|A|C|1837
8C8X|1|A|C|1838
8C8X|1|A|G|1839
8C8X|1|A|G|1840
*
8C8X|1|A|C|1902
8C8X|1|A|G|1903

Current chains

Chain A

23S rRNA

Nearby chains