IL_8C8X_115

3D structure

PDB id

8C8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.93 Å

Loop

Sequence

GGAGGC*GCCGACCUUGAAAUAC

Length

22 nucleotides

Bulged bases

8C8X|1|A|C|2164, 8C8X|1|A|C|2165, 8C8X|1|A|U|2166, 8C8X|1|A|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C8X|1|A|G|2124
8C8X|1|A|G|2125
8C8X|1|A|A|2126
8C8X|1|A|G|2127
8C8X|1|A|G|2128
8C8X|1|A|C|2129
*
8C8X|1|A|G|2159
8C8X|1|A|C|2160
8C8X|1|A|C|2161
8C8X|1|A|G|2162
8C8X|1|A|A|2163
8C8X|1|A|C|2164
8C8X|1|A|C|2165
8C8X|1|A|U|2166
8C8X|1|A|U|2167
8C8X|1|A|G|2168
8C8X|1|A|A|2169
8C8X|1|A|A|2170
8C8X|1|A|A|2171
8C8X|1|A|U|2172
8C8X|1|A|A|2173
8C8X|1|A|C|2174

Current chains

Chain A

23S rRNA

Nearby chains