IL_8C8X_116

3D structure

PDB id

8C8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.93 Å

Loop

Sequence

CAUCACU*AAAUG

Length

12 nucleotides

Bulged bases

8C8X|1|A|A|2726

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C8X|1|A|C|2678
8C8X|1|A|A|2679
8C8X|1|A|U|2680
8C8X|1|A|C|2681
8C8X|1|A|A|2682
8C8X|1|A|C|2683
8C8X|1|A|U|2684
*
8C8X|1|A|A|2725
8C8X|1|A|A|2726
8C8X|1|A|A|2727
8C8X|1|A|U|2728
8C8X|1|A|G|2729

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain K

50S ribosomal protein L14

Chain N

50S ribosomal protein L17

Chain P

50S ribosomal protein L19