IL_8C8Y_103

3D structure

PDB id

8C8Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.03 Å

Loop

Sequence

UGAUGUGUAGGAUAGGU*ACCCUUUA

Length

25 nucleotides

Bulged bases

8C8Y|1|A|U|2109, 8C8Y|1|A|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C8Y|1|A|U|2106
8C8Y|1|A|G|2107
8C8Y|1|A|A|2108
8C8Y|1|A|U|2109
8C8Y|1|A|G|2110
8C8Y|1|A|U|2111
8C8Y|1|A|G|2112
8C8Y|1|A|U|2113
8C8Y|1|A|A|2114
8C8Y|1|A|G|2115
8C8Y|1|A|G|2116
8C8Y|1|A|A|2117
8C8Y|1|A|U|2118
8C8Y|1|A|A|2119
8C8Y|1|A|G|2120
8C8Y|1|A|G|2121
8C8Y|1|A|U|2122
*
8C8Y|1|A|A|2176
8C8Y|1|A|C|2177
8C8Y|1|A|C|2178
8C8Y|1|A|C|2179
8C8Y|1|A|U|2180
8C8Y|1|A|U|2181
8C8Y|1|A|U|2182
8C8Y|1|A|A|2183

Current chains

Chain A

23S rRNA

Nearby chains