IL_8C8Y_104

3D structure

PDB id

8C8Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.03 Å

Loop

Sequence

CUUUGAAGUG*CAUGGAG

Length

17 nucleotides

Bulged bases

8C8Y|1|A|U|2131, 8C8Y|1|A|U|2132, 8C8Y|1|A|G|2133, 8C8Y|1|A|U|2155

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C8Y|1|A|C|2129
8C8Y|1|A|U|2130
8C8Y|1|A|U|2131
8C8Y|1|A|U|2132
8C8Y|1|A|G|2133
8C8Y|1|A|A|2134
8C8Y|1|A|A|2135
8C8Y|1|A|G|2136
8C8Y|1|A|U|2137
8C8Y|1|A|G|2138
*
8C8Y|1|A|C|2153
8C8Y|1|A|A|2154
8C8Y|1|A|U|2155
8C8Y|1|A|G|2156
8C8Y|1|A|G|2157
8C8Y|1|A|A|2158
8C8Y|1|A|G|2159

Current chains

Chain A

23S rRNA

Nearby chains