IL_8C8Z_044

3D structure

PDB id

8C8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.12 Å

Loop

Sequence

UGCGAAG*CUAAGCAUCAG

Length

18 nucleotides

Bulged bases

8C8Z|1|A|A|1420, 8C8Z|1|A|U|1584

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C8Z|1|A|U|1415
8C8Z|1|A|G|1416
8C8Z|1|A|C|1417
8C8Z|1|A|G|1418
8C8Z|1|A|A|1419
8C8Z|1|A|A|1420
8C8Z|1|A|G|1421
*
8C8Z|1|A|C|1577
8C8Z|1|A|U|1578
8C8Z|1|A|A|1579
8C8Z|1|A|A|1580
8C8Z|1|A|G|1581
8C8Z|1|A|C|1582
8C8Z|1|A|A|1583
8C8Z|1|A|U|1584
8C8Z|1|A|C|1585
8C8Z|1|A|A|1586
8C8Z|1|A|G|1587

Current chains

Chain A

23S rRNA

Nearby chains