IL_8C90_022

3D structure

PDB id

8C90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

GGGUAG*CGAAUAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C90|1|A|G|857
8C90|1|A|G|858
8C90|1|A|G|859
8C90|1|A|U|860
8C90|1|A|A|861
8C90|1|A|G|862
*
8C90|1|A|C|915
8C90|1|A|G|916
8C90|1|A|A|917
8C90|1|A|A|918
8C90|1|A|U|919
8C90|1|A|A|920
8C90|1|A|C|921

Current chains

Chain A

23S rRNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain W

50S ribosomal protein L27

Chain Z

50S ribosomal protein L30