IL_8C92_067

3D structure

PDB id

8C92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.79 Å

Loop

Sequence

UUAAGUGGGAAAC*GGAAGAUGUAACGGGGCUAAA

Length

34 nucleotides

Bulged bases

8C92|1|A|U|1130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C92|1|A|U|1018
8C92|1|A|U|1019
8C92|1|A|A|1020
8C92|1|A|A|1021
8C92|1|A|G|1022
8C92|1|A|U|1023
8C92|1|A|G|1024
8C92|1|A|G|1025
8C92|1|A|G|1026
8C92|1|A|A|1027
8C92|1|A|A|1028
8C92|1|A|A|1029
8C92|1|A|C|1030
*
8C92|1|A|G|1124
8C92|1|A|G|1125
8C92|1|A|A|1126
8C92|1|A|A|1127
8C92|1|A|G|1128
8C92|1|A|A|1129
8C92|1|A|U|1130
8C92|1|A|G|1131
8C92|1|A|U|1132
8C92|1|A|A|1133
8C92|1|A|A|1134
8C92|1|A|C|1135
8C92|1|A|G|1136
8C92|1|A|G|1137
8C92|1|A|G|1138
8C92|1|A|G|1139
8C92|1|A|C|1140
8C92|1|A|U|1141
8C92|1|A|A|1142
8C92|1|A|A|1143
8C92|1|A|A|1144

Current chains

Chain A

23S rRNA

Nearby chains

Chain J

50S ribosomal protein L13