IL_8C92_072

3D structure

PDB id

8C92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.79 Å

Loop

Sequence

GAAGGAACUAGG*CUGUCUCC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C92|1|A|G|1663
8C92|1|A|A|1664
8C92|1|A|A|1665
8C92|1|A|G|1666
8C92|1|A|G|1667
8C92|1|A|A|1668
8C92|1|A|A|1669
8C92|1|A|C|1670
8C92|1|A|U|1671
8C92|1|A|A|1672
8C92|1|A|G|1673
8C92|1|A|G|1674
*
8C92|1|A|C|1990
8C92|1|A|U|1991
8C92|1|A|G|1992
8C92|1|A|U|1993
8C92|1|A|C|1994
8C92|1|A|U|1995
8C92|1|A|C|1996
8C92|1|A|C|1997

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain K

50S ribosomal protein L14

Chain P

50S ribosomal protein L19