IL_8CCS_240

3D structure

PDB id

8CCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex

Experimental method

ELECTRON MICROSCOPY

Resolution

1.97 Å

Loop

Sequence

UGGG*CUUUGUA

Length

11 nucleotides

Bulged bases

8CCS|1|AA|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CCS|1|AA|U|169
8CCS|1|AA|G|170
8CCS|1|AA|G|171
8CCS|1|AA|G|172
*
8CCS|1|AA|C|247
8CCS|1|AA|U|248
8CCS|1|AA|U|249
8CCS|1|AA|U|250
8CCS|1|AA|G|251
8CCS|1|AA|U|252
8CCS|1|AA|A|253

Current chains

Chain AA

25S ribosomal RNA

Nearby chains

Chain OO

60S ribosomal protein L13-A

Chain T

60S ribosomal protein L35-A