IL_8CCS_243

3D structure

PDB id

8CCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex

Experimental method

ELECTRON MICROSCOPY

Resolution

1.97 Å

Loop

Sequence

UUCCGGG*CUUGA

Length

12 nucleotides

Bulged bases

8CCS|1|AA|U|1015, 8CCS|1|AA|C|1016

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CCS|1|AA|U|1014
8CCS|1|AA|U|1015
8CCS|1|AA|C|1016
8CCS|1|AA|C|1017
8CCS|1|AA|G|1018
8CCS|1|AA|G|1019
8CCS|1|AA|G|1020
*
8CCS|1|AA|C|1032
8CCS|1|AA|U|1033
8CCS|1|AA|U|1034
8CCS|1|AA|G|1035
8CCS|1|AA|A|1036

Current chains

Chain AA

25S ribosomal RNA

Nearby chains

Chain Bb

Transfer RNA; tRNA

Chain MM

60S ribosomal protein L10

Chain NN

60S ribosomal protein L11-A