IL_8CDU_030

3D structure

PDB id

8CDU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rnase R bound to a 30S degradation intermediate (main state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUCC*GGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CDU|1|A|U|686
8CDU|1|A|U|687
8CDU|1|A|C|688
8CDU|1|A|C|689
*
8CDU|1|A|G|719
8CDU|1|A|G|720
8CDU|1|A|A|721
8CDU|1|A|G|722

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S6

Chain V

30S ribosomal protein S11