IL_8CEP_018
3D structure
- PDB id
- 8CEP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Round2 30S head (no antibiotic)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.04 Å
Loop
- Sequence
- UGAAGAAG*UUGUAAAG
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CEP_018 not in the Motif Atlas
- Homologous match to IL_6CZR_129
- Geometric discrepancy: 0.1953
- The information below is about IL_6CZR_129
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58819.1
- Basepair signature
- cWW-L-R-tWH-R-L-tHW-tSS-R-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
8CEP|1|A|U|409
8CEP|1|A|G|410
8CEP|1|A|A|411
8CEP|1|A|A|412
8CEP|1|A|G|413
8CEP|1|A|A|414
8CEP|1|A|A|415
8CEP|1|A|G|416
*
8CEP|1|A|U|426
8CEP|1|A|U|427
8CEP|1|A|G|428
8CEP|1|A|U|429
8CEP|1|A|A|430
8CEP|1|A|A|431
8CEP|1|A|A|432
8CEP|1|A|G|433
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain D
- Small ribosomal subunit protein uS4
Coloring options: