IL_8CEP_047
3D structure
- PDB id
- 8CEP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Round2 30S head (no antibiotic)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.04 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 8CEP|1|A|A|572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CEP_047 not in the Motif Atlas
- Homologous match to IL_5J7L_026
- Geometric discrepancy: 0.0762
- The information below is about IL_5J7L_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.3
- Basepair signature
- cWW-L-cWW-R-L-R
- Number of instances in this motif group
- 5
Unit IDs
8CEP|1|A|C|569
8CEP|1|A|G|570
8CEP|1|A|U|571
8CEP|1|A|A|572
8CEP|1|A|A|573
8CEP|1|A|A|574
8CEP|1|A|G|575
*
8CEP|1|A|C|880
8CEP|1|A|G|881
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain E
- Small ribosomal subunit protein uS5
- Chain H
- Small ribosomal subunit protein uS8
- Chain L
- Small ribosomal subunit protein uS12
- Chain Q
- Small ribosomal subunit protein uS17
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