IL_8CF5_243
3D structure
- PDB id
- 8CF5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.71 Å
Loop
- Sequence
- UUCCGGG*CUUGA
- Length
- 12 nucleotides
- Bulged bases
- 8CF5|1|AA|U|1015, 8CF5|1|AA|C|1016
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8CF5|1|AA|U|1014
8CF5|1|AA|U|1015
8CF5|1|AA|C|1016
8CF5|1|AA|C|1017
8CF5|1|AA|G|1018
8CF5|1|AA|G|1019
8CF5|1|AA|G|1020
*
8CF5|1|AA|C|1032
8CF5|1|AA|U|1033
8CF5|1|AA|U|1034
8CF5|1|AA|G|1035
8CF5|1|AA|A|1036
Current chains
- Chain AA
- 25S ribosomal RNA
Nearby chains
- Chain Bb
- Transfer RNA; tRNA
- Chain HH
- 60S ribosomal protein L5
- Chain MM
- 60S ribosomal protein L10
Coloring options: