IL_8CGJ_028
3D structure
- PDB id
- 8CGJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Streptomycin bound to the 30S body
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.79 Å
Loop
- Sequence
- UAA*UG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CGJ_028 not in the Motif Atlas
- Homologous match to IL_5J7L_028
- Geometric discrepancy: 0.0667
- The information below is about IL_5J7L_028
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48076.6
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 41
Unit IDs
8CGJ|1|A|U|594
8CGJ|1|A|A|595
8CGJ|1|A|A|596
*
8CGJ|1|A|U|644
8CGJ|1|A|G|645
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain H
- Small ribosomal subunit protein uS8
- Chain Q
- Small ribosomal subunit protein uS17
Coloring options: