IL_8CGJ_050
3D structure
- PDB id
- 8CGJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Streptomycin bound to the 30S body
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.79 Å
Loop
- Sequence
- UAG*CG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CGJ_050 not in the Motif Atlas
- Homologous match to IL_5J7L_064
- Geometric discrepancy: 0.2488
- The information below is about IL_5J7L_064
- Detailed Annotation
- Single bulged A
- Broad Annotation
- Single bulged A
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
8CGJ|1|A|U|1440
8CGJ|1|A|A|1441
8CGJ|1|A|G|1442
*
8CGJ|1|A|C|1460
8CGJ|1|A|G|1461
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain T
- 30S ribosomal protein S20
Coloring options: