IL_8CGK_104

3D structure

PDB id

8CGK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Lincomycin and Avilamycin bound to the 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.64 Å

Loop

Sequence

CCUGAAUCA*UGUGAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CGK|1|a|C|274
8CGK|1|a|C|275
8CGK|1|a|U|276
8CGK|1|a|G|277
8CGK|1|a|A|278
8CGK|1|a|A|279
8CGK|1|a|U|280
8CGK|1|a|C|281
8CGK|1|a|A|282
*
8CGK|1|a|U|358
8CGK|1|a|G|359
8CGK|1|a|U|360
8CGK|1|a|G|361
8CGK|1|a|A|362
8CGK|1|a|G|363

Current chains

Chain a

23S rRNA

Nearby chains