IL_8CGN_203
3D structure
- PDB id
- 8CGN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Non-rotated 80S S. cerevisiae ribosome with ligands
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.28 Å
Loop
- Sequence
- UUGUCAG*CUUGGAUUUA
- Length
- 17 nucleotides
- Bulged bases
- 8CGN|1|c|G|913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CGN_203 not in the Motif Atlas
- Homologous match to IL_8C3A_440
- Geometric discrepancy: 0.2352
- The information below is about IL_8C3A_440
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_22252.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
8CGN|1|c|U|893
8CGN|1|c|U|894
8CGN|1|c|G|895
8CGN|1|c|U|896
8CGN|1|c|C|897
8CGN|1|c|A|898
8CGN|1|c|G|899
*
8CGN|1|c|C|910
8CGN|1|c|U|911
8CGN|1|c|U|912
8CGN|1|c|G|913
8CGN|1|c|G|914
8CGN|1|c|A|915
8CGN|1|c|U|916
8CGN|1|c|U|917
8CGN|1|c|U|918
8CGN|1|c|A|919
Current chains
- Chain c
- 18S ribosomal RNA
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain e
- 40S ribosomal protein S1-A
- Chain q
- 40S ribosomal protein S14-A
Coloring options: