IL_8CGV_010

3D structure

PDB id

8CGV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tiamulin bound to the 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.66 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8CGV_010 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.3784

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

8CGV|1|a|C|274
8CGV|1|a|C|275
8CGV|1|a|U|276
8CGV|1|a|G|277
8CGV|1|a|A|278
8CGV|1|a|A|279
8CGV|1|a|U|280
8CGV|1|a|C|281
*
8CGV|1|a|G|359
8CGV|1|a|U|360
8CGV|1|a|G|361
8CGV|1|a|A|362
8CGV|1|a|G|363

Current chains

Chain a

23S rRNA

Nearby chains