IL_8CGV_102

3D structure

PDB id

8CGV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tiamulin bound to the 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.66 Å

Loop

Sequence

CU*AAG

Length

5 nucleotides

Bulged bases

8CGV|1|a|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8CGV_102 not in the Motif Atlas

Geometric match to IL_4WF9_022

Geometric discrepancy: 0.2

The information below is about IL_4WF9_022

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

130

Unit IDs

8CGV|1|a|C|2795
8CGV|1|a|U|2796
*
8CGV|1|a|A|2799
8CGV|1|a|A|2800
8CGV|1|a|G|2801

Current chains

Chain a

23S rRNA

Nearby chains