IL_8CH6_011
3D structure
- PDB id
- 8CH6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a late-stage activated spliceosome (BAqr) arrested with a dominant-negative Aquarius mutant (state B complex).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.9 Å
Loop
- Sequence
- UCUGU*AUGUCA
- Length
- 11 nucleotides
- Bulged bases
- 8CH6|1|g|U|136
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8CH6|1|f|U|39
8CH6|1|f|C|40
8CH6|1|f|U|41
8CH6|1|f|G|42
8CH6|1|f|U|43
*
8CH6|1|g|A|133
8CH6|1|g|U|134
8CH6|1|g|G|135
8CH6|1|g|U|136
8CH6|1|g|C|137
8CH6|1|g|A|138
Current chains
- Chain f
- RNU2-1
- Chain g
- MINX-M3
Nearby chains
- Chain C
- Splicing factor 3B subunit 1
- Chain E
- Splicing factor 3B subunit 2
- Chain I
- Splicing factor 3A subunit 2
- Chain J
- Splicing factor 3A subunit 3
- Chain P
- Cell division cycle 5-like protein
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