IL_8CRE_003

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AUC*GU

Length

5 nucleotides

Bulged bases

8CRE|1|1|U|13

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

8CRE|1|1|A|12
8CRE|1|1|U|13
8CRE|1|1|C|14
*
8CRE|1|4|G|144
8CRE|1|4|U|145

Current chains

Chain 1

25S

Chain 4

5.8S

Nearby chains

Chain 8

60S ribosomal protein L25

Chain p

60S ribosomal protein L8

Chain v

60S ribosomal protein L15-A