IL_8CRE_028

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUGAUG*CGGAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

8CRE|1|1|C|754
8CRE|1|1|U|755
8CRE|1|1|G|756
8CRE|1|1|A|757
8CRE|1|1|U|758
8CRE|1|1|G|759
*
8CRE|1|1|C|764
8CRE|1|1|G|765
8CRE|1|1|G|766
8CRE|1|1|A|767
8CRE|1|1|U|768
8CRE|1|1|G|769

Current chains

Chain 1

25S

Nearby chains

Chain AB

60S ribosomal protein L28

Chain AP

60S ribosomal protein L42-B

Chain t

60S ribosomal protein L13