IL_8CRE_053

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AUG*CU

Length

5 nucleotides

Bulged bases

8CRE|1|1|U|1177

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

8CRE|1|1|A|1176
8CRE|1|1|U|1177
8CRE|1|1|G|1178
*
8CRE|1|1|C|1320
8CRE|1|1|U|1321

Current chains

Chain 1

25S

Nearby chains

Chain 0

60S ribosomal protein L20

Chain AG

60S ribosomal protein L33-A

Chain o

60S ribosomal protein L7-A

Chain u

60S ribosomal protein L14-B

Chain w

Ribosomal protein L13