IL_8CRE_057

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UCUAGACAG*CCGAA

Length

14 nucleotides

Bulged bases

8CRE|1|1|A|1217

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_99692.2

Basepair signature

cWW-tSS-tSH-L-R-R-L-cWW-L-L

Number of instances in this motif group

6

Unit IDs

8CRE|1|1|U|1214
8CRE|1|1|C|1215
8CRE|1|1|U|1216
8CRE|1|1|A|1217
8CRE|1|1|G|1218
8CRE|1|1|A|1219
8CRE|1|1|C|1220
8CRE|1|1|A|1221
8CRE|1|1|G|1222
*
8CRE|1|1|C|1279
8CRE|1|1|C|1280
8CRE|1|1|G|1281
8CRE|1|1|A|1282
8CRE|1|1|A|1283

Current chains

Chain 1

25S

Nearby chains

Chain 0

60S ribosomal protein L20

Chain AN

60S ribosomal protein L40-B

Chain P0

60S acidic ribosomal protein P0