IL_8CRE_067
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CUAAG*CGAAAG
- Length
- 11 nucleotides
- Bulged bases
- 8CRE|1|1|A|1584, 8CRE|1|1|A|1585
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
8CRE|1|1|C|1528
8CRE|1|1|U|1529
8CRE|1|1|A|1530
8CRE|1|1|A|1531
8CRE|1|1|G|1532
*
8CRE|1|1|C|1581
8CRE|1|1|G|1582
8CRE|1|1|A|1583
8CRE|1|1|A|1584
8CRE|1|1|A|1585
8CRE|1|1|G|1586
Current chains
- Chain 1
- 25S
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AH
- 60S ribosomal protein L34-B
- Chain AK
- 60S ribosomal protein L37-B
- Chain AM
- 60S ribosomal protein L39
- Chain j
- 60S ribosomal protein L2-B
Coloring options: