IL_8CRE_076

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUAAC*GGAAGA

Length

11 nucleotides

Bulged bases

8CRE|1|1|G|1747

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_00981.1

Basepair signature

cWW-tWH-tHH-tHS-cWW

Number of instances in this motif group

2

Unit IDs

8CRE|1|1|U|1690
8CRE|1|1|U|1691
8CRE|1|1|A|1692
8CRE|1|1|A|1693
8CRE|1|1|C|1694
*
8CRE|1|1|G|1743
8CRE|1|1|G|1744
8CRE|1|1|A|1745
8CRE|1|1|A|1746
8CRE|1|1|G|1747
8CRE|1|1|A|1748

Current chains

Chain 1

25S

Nearby chains

Chain AH

60S ribosomal protein L34-B

Chain AL

60S ribosomal protein L38