3D structure

PDB id
8CRE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
UCAAAGU*AACCAAG
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_88116.2
Basepair signature
cWW-tSH-L-R-L-R-L-R-cWW-cWW
Number of instances in this motif group
3

Unit IDs

8CRE|1|1|U|2189
8CRE|1|1|C|2190
8CRE|1|1|A|2191
8CRE|1|1|A|2192
8CRE|1|1|A|2193
8CRE|1|1|G|2194
8CRE|1|1|U|2195
*
8CRE|1|1|A|2206
8CRE|1|1|A|2207
8CRE|1|1|C|2208
8CRE|1|1|C|2209
8CRE|1|1|A|2210
8CRE|1|1|A|2211
8CRE|1|1|G|2212

Current chains

Chain 1
25S

Nearby chains

Chain AJ
60S ribosomal protein L36
Chain AP
60S ribosomal protein L42-B

Coloring options:

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