IL_8CRE_101

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAUGG*UAUAG

Length

10 nucleotides

Bulged bases

8CRE|1|1|A|2480

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68909.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

8CRE|1|1|C|2422
8CRE|1|1|A|2423
8CRE|1|1|U|2424
8CRE|1|1|G|2425
8CRE|1|1|G|2426
*
8CRE|1|1|U|2477
8CRE|1|1|A|2478
8CRE|1|1|U|2479
8CRE|1|1|A|2480
8CRE|1|1|G|2481

Current chains

Chain 1

25S

Nearby chains

Chain AJ

60S ribosomal protein L36

Chain l1

Ribosomal protein