IL_8CRE_123

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAAU*AGAACG

Length

10 nucleotides

Bulged bases

8CRE|1|1|A|3114, 8CRE|1|1|C|3115

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_09705.15

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

8CRE|1|1|C|2976
8CRE|1|1|A|2977
8CRE|1|1|A|2978
8CRE|1|1|U|2979
*
8CRE|1|1|A|3111
8CRE|1|1|G|3112
8CRE|1|1|A|3113
8CRE|1|1|A|3114
8CRE|1|1|C|3115
8CRE|1|1|G|3116

Current chains

Chain 1

25S

Nearby chains

Chain k

60S ribosomal protein L3

Chain w

Ribosomal protein L13

Chain x

Ribosomal protein L22