IL_8CRE_129

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AUUAU*AGAAU

Length

10 nucleotides

Bulged bases

8CRE|1|1|A|3102

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

8CRE|1|1|A|3075
8CRE|1|1|U|3076
8CRE|1|1|U|3077
8CRE|1|1|A|3078
8CRE|1|1|U|3079
*
8CRE|1|1|A|3099
8CRE|1|1|G|3100
8CRE|1|1|A|3101
8CRE|1|1|A|3102
8CRE|1|1|U|3103

Current chains

Chain 1

25S

Nearby chains

Chain AN

60S ribosomal protein L40-B

Chain q

60S ribosomal protein L9-B

Chain w

Ribosomal protein L13