IL_8CRE_139

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGUAAG*CUGAG

Length

11 nucleotides

Bulged bases

8CRE|1|1|G|3334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70411.2

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

8CRE|1|1|U|3297
8CRE|1|1|G|3298
8CRE|1|1|U|3299
8CRE|1|1|A|3300
8CRE|1|1|A|3301
8CRE|1|1|G|3302
*
8CRE|1|1|C|3332
8CRE|1|1|U|3333
8CRE|1|1|G|3334
8CRE|1|1|A|3335
8CRE|1|1|G|3336

Current chains

Chain 1

25S

Nearby chains

Chain 7

60S ribosomal protein L24-A

Chain AE

60S ribosomal protein L31-B

Chain k

60S ribosomal protein L3