IL_8CRE_157
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AU*AGUUGU
- Length
- 8 nucleotides
- Bulged bases
- 8CRE|1|AS|U|146
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRE_157 not in the Motif Atlas
- Homologous match to IL_8C3A_007
- Geometric discrepancy: 0.0584
- The information below is about IL_8C3A_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_19724.3
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
8CRE|1|AS|A|122
8CRE|1|AS|U|123
*
8CRE|1|AS|A|143
8CRE|1|AS|G|144
8CRE|1|AS|U|145
8CRE|1|AS|U|146
8CRE|1|AS|G|147
8CRE|1|AS|U|148
Current chains
- Chain AS
- 25S
Nearby chains
- Chain AU
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BC
- 60S ribosomal protein L8
- Chain BI
- 60S ribosomal protein L15-A
- Chain CC
- Ribosomal protein L29
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