IL_8CRE_160
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UG*UGUGUA
- Length
- 8 nucleotides
- Bulged bases
- 8CRE|1|AS|U|250, 8CRE|1|AS|U|252
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRE_160 not in the Motif Atlas
- Homologous match to IL_8C3A_010
- Geometric discrepancy: 0.1242
- The information below is about IL_8C3A_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_33817.1
- Basepair signature
- cWW-R-L-L-L
- Number of instances in this motif group
- 1
Unit IDs
8CRE|1|AS|U|168
8CRE|1|AS|G|169
*
8CRE|1|AS|U|248
8CRE|1|AS|G|249
8CRE|1|AS|U|250
8CRE|1|AS|G|251
8CRE|1|AS|U|252
8CRE|1|AS|A|253
Current chains
- Chain AS
- 25S
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain BC
- 60S ribosomal protein L8
- Chain BG
- 60S ribosomal protein L13
- Chain CC
- Ribosomal protein L29
- Chain l
- 60S ribosomal protein L4-B
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