IL_8CRE_190

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGUAUC*GAAG

Length

10 nucleotides

Bulged bases

8CRE|1|AS|A|1099

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8CRE_190 not in the Motif Atlas

Homologous match to IL_8C3A_039

Geometric discrepancy: 0.1193

The information below is about IL_8C3A_039

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_59027.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

1

Unit IDs

8CRE|1|AS|C|973
8CRE|1|AS|G|974
8CRE|1|AS|U|975
8CRE|1|AS|A|976
8CRE|1|AS|U|977
8CRE|1|AS|C|978
*
8CRE|1|AS|G|1097
8CRE|1|AS|A|1098
8CRE|1|AS|A|1099
8CRE|1|AS|G|1100

Current chains

Chain AS

25S

Nearby chains

Chain BB

60S ribosomal protein L7-A

Chain BL

60S ribosomal protein L18-A

Chain BW

60S ribosomal protein L29