IL_8CRE_255

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGGUGUAGAAUAAGUGGGAG*CGCCGGUGAAAUACCACUACCU

Length

42 nucleotides

Bulged bases

8CRE|1|AS|U|2438, 8CRE|1|AS|G|2459, 8CRE|1|AS|U|2465

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CRE|1|AS|G|2428
8CRE|1|AS|G|2429
8CRE|1|AS|G|2430
8CRE|1|AS|U|2431
8CRE|1|AS|G|2432
8CRE|1|AS|U|2433
8CRE|1|AS|A|2434
8CRE|1|AS|G|2435
8CRE|1|AS|A|2436
8CRE|1|AS|A|2437
8CRE|1|AS|U|2438
8CRE|1|AS|A|2439
8CRE|1|AS|A|2440
8CRE|1|AS|G|2441
8CRE|1|AS|U|2442
8CRE|1|AS|G|2443
8CRE|1|AS|G|2444
8CRE|1|AS|G|2445
8CRE|1|AS|A|2446
8CRE|1|AS|G|2447
*
8CRE|1|AS|C|2454
8CRE|1|AS|G|2455
8CRE|1|AS|C|2456
8CRE|1|AS|C|2457
8CRE|1|AS|G|2458
8CRE|1|AS|G|2459
8CRE|1|AS|U|2460
8CRE|1|AS|G|2461
8CRE|1|AS|A|2462
8CRE|1|AS|A|2463
8CRE|1|AS|A|2464
8CRE|1|AS|U|2465
8CRE|1|AS|A|2466
8CRE|1|AS|C|2467
8CRE|1|AS|C|2468
8CRE|1|AS|A|2469
8CRE|1|AS|C|2470
8CRE|1|AS|U|2471
8CRE|1|AS|A|2472
8CRE|1|AS|C|2473
8CRE|1|AS|C|2474
8CRE|1|AS|U|2475

Current chains

Chain AS

25S

Nearby chains

Chain CD

60S ribosomal protein L36

Chain L1

Ribosomal protein