IL_8CRE_273
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CAAU*AGAACG
- Length
- 10 nucleotides
- Bulged bases
- 8CRE|1|AS|A|3114, 8CRE|1|AS|C|3115
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRE_273 not in the Motif Atlas
- Homologous match to IL_8P9A_342
- Geometric discrepancy: 0.0477
- The information below is about IL_8P9A_342
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.15
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
8CRE|1|AS|C|2976
8CRE|1|AS|A|2977
8CRE|1|AS|A|2978
8CRE|1|AS|U|2979
*
8CRE|1|AS|A|3111
8CRE|1|AS|G|3112
8CRE|1|AS|A|3113
8CRE|1|AS|A|3114
8CRE|1|AS|C|3115
8CRE|1|AS|G|3116
Current chains
- Chain AS
- 25S
Nearby chains
- Chain AU
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AX
- 60S ribosomal protein L3
- Chain BJ
- Ribosomal protein L13
Coloring options: