IL_8CRE_342

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUUA*UC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8CRE_342 not in the Motif Atlas

Homologous match to IL_8C3A_434

Geometric discrepancy: 0.1158

The information below is about IL_8C3A_434

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22551.2

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

9

Unit IDs

8CRE|1|B|G|803
8CRE|1|B|U|804
8CRE|1|B|U|805
8CRE|1|B|A|806
*
8CRE|1|B|U|836
8CRE|1|B|C|837

Current chains

Chain B

18S

Nearby chains

Chain z

60S ribosomal protein L19-A