3D structure

PDB id
8CRE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
UCGU*AA
Length
6 nucleotides
Bulged bases
8CRE|1|CM|C|114, 8CRE|1|CM|G|115
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_82107.5
Basepair signature
cWW-cWW
Number of instances in this motif group
31

Unit IDs

8CRE|1|CM|U|113
8CRE|1|CM|C|114
8CRE|1|CM|G|115
8CRE|1|CM|U|116
*
8CRE|1|CM|A|298
8CRE|1|CM|A|299

Current chains

Chain CM
18S

Nearby chains

Chain CR
40S ribosomal protein S4
Chain CV
40S ribosomal protein S8
Chain CY
40S ribosomal protein S11A

Coloring options:

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