IL_8CRE_409

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUUCGA*UG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_99380.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

1

Unit IDs

8CRE|1|CM|U|316
8CRE|1|CM|U|317
8CRE|1|CM|U|318
8CRE|1|CM|C|319
8CRE|1|CM|G|320
8CRE|1|CM|A|321
*
8CRE|1|CM|U|343
8CRE|1|CM|G|344

Current chains

Chain CM

18S

Nearby chains

Chain AS

Large subunit ribosomal RNA; LSU rRNA

Chain BM

60S ribosomal protein L19-A

Chain CV

40S ribosomal protein S8

Chain CY

40S ribosomal protein S11A