IL_8CRE_427

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGGCCGGUC*GCGUACUGGACCCA

Length

23 nucleotides

Bulged bases

8CRE|1|CM|C|670, 8CRE|1|CM|C|679

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15991.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-L

Number of instances in this motif group

1

Unit IDs

8CRE|1|CM|U|648
8CRE|1|CM|G|649
8CRE|1|CM|G|650
8CRE|1|CM|C|651
8CRE|1|CM|C|652
8CRE|1|CM|G|653
8CRE|1|CM|G|654
8CRE|1|CM|U|655
8CRE|1|CM|C|656
*
8CRE|1|CM|G|669
8CRE|1|CM|C|670
8CRE|1|CM|G|671
8CRE|1|CM|U|672
8CRE|1|CM|A|673
8CRE|1|CM|C|674
8CRE|1|CM|U|675
8CRE|1|CM|G|676
8CRE|1|CM|G|677
8CRE|1|CM|A|678
8CRE|1|CM|C|679
8CRE|1|CM|C|680
8CRE|1|CM|C|681
8CRE|1|CM|A|682

Current chains

Chain CM

18S

Nearby chains

Chain CR

40S ribosomal protein S4

Chain CW

Ribosomal protein S4