IL_8CRE_439
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGA*UCUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 8CRE|1|CM|C|1081, 8CRE|1|CM|U|1083, 8CRE|1|CM|G|1085
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82706.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
8CRE|1|CM|C|1019
8CRE|1|CM|G|1020
8CRE|1|CM|A|1021
*
8CRE|1|CM|U|1080
8CRE|1|CM|C|1081
8CRE|1|CM|U|1082
8CRE|1|CM|U|1083
8CRE|1|CM|U|1084
8CRE|1|CM|G|1085
8CRE|1|CM|G|1086
Current chains
- Chain CM
- 18S
Nearby chains
- Chain CP
- Ribosomal protein S5
- Chain CY
- 40S ribosomal protein S11A
- Chain DA
- 40S ribosomal protein S13
- Chain DI
- 40S ribosomal protein S21
- Chain DJ
- 40S ribosomal protein S22-A
- Chain DK
- Ribosomal protein S23 (S12)
- Chain DO
- 40S ribosomal protein S27
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